Title: Whole Genome Sequencing and Transcriptome of Cumin and Coriander and Bioinformatics Analysis

Tender Reference Number: GEM/2025/B/6158189

Issuing Authority/Department

This tender is issued by the Department of Agricultural Research and Education (DARE), under the Ministry of Agriculture and Farmers Welfare.

Scope of Work and Objectives

The intent of this tender is to conduct comprehensive whole genome sequencing and transcriptome analysis of cumin and coriander. This project includes the employment of advanced genomic techniques such as Illumina NovaSeq 6000, PacBio sequencing, and other detailed bioinformatics analyses to understand and characterize the genetic material of these essential agricultural crops. The objectives are to enhance the understanding of genome structures, variations, and expressions, thereby enabling researchers and stakeholders to make informed decisions in agricultural innovations.

Eligibility Criteria

Interested bidders must satisfy the following eligibility criteria to participate in this tender:

• Must be a registered entity with valid certification.
• Have demonstrated experience in genomic sequencing and related bioinformatics analysis.
• Possession of necessary technical expertise and equipment for conducting high-throughput sequencing tasks.

Technical Requirements

The technical requirements for participating in this tender include:

• Proficiency in whole genome sequencing using Illumina NovaSeq 6000 and PacBio technologies.
• Ability to perform Optical Mapping and Hi-C Sequencing for super scaffolding.
• Competence in handling Full Length Isoform Sequencing using PacBio Sequel II and capable of conducting pan-genome assembly.

Financial Requirements

Bidders must submit proof of their financial stability, including:

• Annual turnover statements for the past three years.
• Evidence of completed projects of similar scope and scale.
• Clarity on pricing structure and total cost implications related to the scope of the work.

Document Submission Details

All documents must be submitted in the specified format through the designated online portal. Bidders are advised to ensure that they adhere to the following:

• All submissions must be in electronic format, preferably PDF or other accepted formats as outlined in the tender instructions.
• Submissions should be clear, complete, and within the specified timeline.

Special Provisions

The tender includes special provisions aimed at supporting Micro, Small, and Medium Enterprises (MSEs) and startups. Bidders from these segments might enjoy relaxed eligibility criteria and additional consideration during the evaluation process.

Evaluation Process

The evaluation process will assess bids based on:

• Compliance with technical specifications.
• Financial viability and cost-effectiveness.
• Overall approach and methodology proposed by the bidder in their submission.

Delivery Locations

The successful bidder(s) will be required to deliver services as designated by the Department, adhering to any specific location specifications provided in the subsequent phases of the project execution.

Contact Information

For inquiries related to this tender, potential bidders are encouraged to reach out to the designated contact within the issuing authority, though specific contact information is currently unavailable.

This tender offers a unique opportunity for advancing agricultural research through innovative genomics. Interested parties are urged to prepare and submit their bids adhering closely to the established eligibility and technical requirements.